CC ************************************************************************* CC CC ************************* CC *** PROSITE data file *** CC ************************* CC CC Release 16.0 of July 1999 and updates up to September 2000. CC CC ************************************************************************* CC CC The patterns section of PROSITE is developed by: CC CC Amos Bairoch CC Swiss Institute of Bioinformatics (SIB) CC CMU CC University of Geneva CC 1, Rue Michel Servet, 1211 Geneva 4 CC Switzerland CC CC Email : bairoch@medecine.unige.ch CC Telephone: +41-22-784 40 82 CC CC CC The profiles/matrices section of PROSITE is developed by: CC CC Philipp Bucher CC Swiss Institute of Bioinformatics (SIB) CC Institut Suisse de Recherches Experimentales sur le Cancer CC 155 ch. des Boveresses, 1066 Epalinges s/Lausanne CC Switzerland CC CC Email : pbucher@isrec-sun1.unil.ch CC Telephone: +41-21-692 58 92 CC CC ************************************************************************* CC CC This file may be copied and redistributed freely, without advance CC permission. You are allowed to reformat it for use with a software CC package, but you should not modify its content without permission CC from the author). CC CC ************************************************************************* // ID ASN_GLYCOSYLATION; PATTERN. AC PS00001; DT APR-1990 (CREATED); APR-1990 (DATA UPDATE); APR-1990 (INFO UPDATE). DE N-glycosylation site. PA N-{P}-[ST]-{P}. CC /TAXO-RANGE=??E?V; CC /SITE=1,carbohydrate; CC /SKIP-FLAG=TRUE; DO PDOC00001; // ID GLYCOSAMINOGLYCAN; RULE. AC PS00002; DT APR-1990 (CREATED); APR-1990 (DATA UPDATE); APR-1990 (INFO UPDATE). DE Glycosaminoglycan attachment site. PA S-G-x-G. RU Additional rules: RU There must be at least two acidic amino acids (Glu or Asp) from -2 to RU -4 relative to the serine. CC /TAXO-RANGE=??E??; CC /SITE=1,glycosaminoglycan; CC /SKIP-FLAG=TRUE; DO PDOC00002; // ID SULFATION; RULE. AC PS00003; DT APR-1990 (CREATED); APR-1990 (DATA UPDATE); APR-1990 (INFO UPDATE). DE Tyrosine sulfation site. RU (1) Glu or Asp within two residues of the tyrosine (typically at -1). RU (2) At least three acidic residues from -5 to +5. RU (3) No more than 1 basic residue and 3 hydrophobic from -5 to +5 RU (4) At least one Pro or Gly from -7 to -2 and from +1 to +7 or at least RU two or three Asp, Ser or Asn from -7 to +7. RU (5) Absence of disulfide-bonded cysteine residues from -7 to +7. RU (6) Absence of N-linked glycans near the tyrosine. CC /TAXO-RANGE=??E??; DO PDOC00003; // ID CAMP_PHOSPHO_SITE; PATTERN. AC PS00004; DT APR-1990 (CREATED); APR-1990 (DATA UPDATE); APR-1990 (INFO UPDATE). DE cAMP- and cGMP-dependent protein kinase phosphorylation site. PA [RK](2)-x-[ST]. CC /TAXO-RANGE=??E?V; CC /SITE=3,phosphorylation; CC /SKIP-FLAG=TRUE; DO PDOC00004; // ID PKC_PHOSPHO_SITE; PATTERN. AC PS00005; DT APR-1990 (CREATED); APR-1990 (DATA UPDATE); APR-1990 (INFO UPDATE). DE Protein kinase C phosphorylation site. PA [ST]-x-[RK]. CC /TAXO-RANGE=??E??; CC /SITE=1,phosphorylation; CC /SKIP-FLAG=TRUE; DO PDOC00005; // ID CK2_PHOSPHO_SITE; PATTERN. AC PS00006; DT APR-1990 (CREATED); APR-1990 (DATA UPDATE); APR-1990 (INFO UPDATE). DE Casein kinase II phosphorylation site. PA [ST]-x(2)-[DE]. CC /TAXO-RANGE=??E??; CC /SITE=1,phosphorylation; CC /SKIP-FLAG=TRUE; DO PDOC00006; // ID TYR_PHOSPHO_SITE; PATTERN. AC PS00007; DT APR-1990 (CREATED); APR-1990 (DATA UPDATE); APR-1990 (INFO UPDATE). DE Tyrosine kinase phosphorylation site. PA [RK]-x(2,3)-[DE]-x(2,3)-Y. CC /TAXO-RANGE=??E?V; CC /SITE=5,phosphorylation; CC /SKIP-FLAG=TRUE; DO PDOC00007; // ID MYRISTYL; PATTERN. AC PS00008; DT APR-1990 (CREATED); APR-1990 (DATA UPDATE); APR-1990 (INFO UPDATE). DE N-myristoylation site. PA G-{EDRKHPFYW}-x(2)-[STAGCN]-{P}. CC /TAXO-RANGE=??E?V; CC /SITE=1,myristyl; CC /SKIP-FLAG=TRUE; DO PDOC00008; //